From some other threads with similar issues:
Do the repair disk using Disk Utility on the drive not the volume. Had same issue and the repair on the drive fixed the GPT/MBR mapping/alignment issue that resulted from the 8.1 upgrade.
Worked for me. Oddly, the first time I did the upgrade, had the problem, and tried Disk Utility, I had no luck. The 2nd time, it worked fine. My upgrade procedure ended up being:
- Change startup disk to Boot Camp partition & reboot into Windows.
- Perform the 8.1 upgrade (it will reboot 3-4 times doing the upgrade).
- Test your newly upgraded Windows, then use the Boot Camp control panel to switch your boot drive back to OSX.
- Once in OSX, (or from the Recovery partition, or a separate boot disk), run disk utility and repair the ENTIRE hard drive--not your individual partitions.
After that, Parallels 8 launched and booted my Boot Camp VM just fine (albeit complaining about an unsupported version being installed.)
Best,
Brad